PAVESI, GIULIO
PAVESI, GIULIO
Dipartimento di Bioscienze
CNRBiOmics and ELIXIRxNextGenIT: establishment and enhancement of the Integrative Omics platform of ELIXIR-IT, the Italian Node of the European Research Infrastructure for Life Sciences
2023 E. Sbisà, A. Cestaro, G. Donvito, F. Licciulli, P. Martelli, G. Pavesi, E. Picardi, G. Piccialli, D. Porro, S. Tosatto, A. Tullo, M. Vanoni, A. Via, F. Zambelli, G. Pesole
SOX2 and NR2F1 coordinate the gene expression program of the early postnatal visual thalamus
2023 L. Serra, A. Nordin, M. Jonasson, C. Marenco, F. Gullo, S. Ottolenghi, F. Zambelli, M. Studer, G. Pavesi, C. Cantù, S.K. Nicolis, S. Mercurio
Human PNPase causes RNA stabilization and accumulation of R-loops in the Escherichia coli model system
2023 F.A. Falchi, F. Forti, C. Carnelli, A. Genco, R. Pizzoccheri, C. Manzari, G. Pavesi, F. Briani
UTRdb 2.0: a comprehensive, expert curated catalog of eukaryotic {mRNAs} untranslated regions
2022 C. Lo Giudice, F. Zambelli, M. Chiara, G. Pavesi, M. Antonio Tangaro, E. Picardi, G. Pesole
The evolutionary history of the polyQ tract in huntingtin sheds light on its functional pro-neural activities
2022 R. Iennaco, G. Formenti, C. Trovesi, R.L. Rossi, C. Zuccato, T. Lischetti, V.D. Bocchi, A. Scolz, C. Martínez-Labarga, O. Rickards, M. Pacifico, A. Crottini, A.P. Møller, R.Z. Chen, T.F. Vogt, G. Pavesi, D.S. Horner, N. Saino, E. Cattaneo
Sox2 controls neural stem cell self-renewal through a Fos-centered gene regulatory network
2021 M. Pagin, M. Pernebrink, S. Giubbolini, C. Barone, G. Sambruni, Y. Zhu, M. Chiara, S. Ottolenghi, G. Pavesi, C.-. Wei, C. Cantu, S.K. Nicolis
FOS rescues neuronal differentiation of Sox2-deleted neural stem cells by genome-wide regulation of common SOX2 and AP1(FOS-JUN) target genes
2021 M. Pagin, M. Pernebrink, M. Pitasi, F. Malighetti, C.-. Ngan, S. Ottolenghi, G. Pavesi, C. Cantu, S.K. Nicolis
Cleaning the medicago microarray database to improve gene function analysis
2021 F. Marzorati, C. Wang, G. Pavesi, L. Mizzi, P. Morandini
Ascan: a novel method for the study of allele specific expression in single individuals
2021 F. Zambelli, M. Chiara, E. Ferrandi, P. Mandreoli, M. Antonio Tangaro, G. Pavesi, G. Pesole
Using RNentropy to Detect Significant Variation in Gene Expression Across Multiple RNA-Seq or Single-Cell RNA-Seq Samples
2021 F. Zambelli, G. Pavesi
The coding and long noncoding single-cell atlas of the developing human fetal striatum
2021 V.D. Bocchi, P. Conforti, E. Vezzoli, D. Besusso, C. Cappadona, T. Lischetti, M. Galimberti, V. Ranzani, R.J.P. Bonnal, M.D. De Simone, G. Rossetti, X. He, K. Kamimoto, I. Espuny-Camacho, A. Faedo, F. Gervasoni, R. Vuono, S.A. Morris, J. Chen, D. Felsenfeld, G. Pavesi, R.A. Barker, M. Pagani, E. Cattaneo
The go-between : a Sox2-regulated gene expression program in relay neurons of the visual thalamus as a possible contributor to inherited vision disease
2020 L. Serra, M. Pernebrink, F. Zambelli, M. Studer, C. Cantù, G. Pavesi, S. Nicolis, S. Mercurio
Histone acetylation landscape in S. cerevisiae nhp6ab mutants reflects altered glucose metabolism
2020 D. Durano, F. Di Felice, F. Caldarelli, A. Lukacs, A. D'Alfonso, M. Saliola, F. Sciubba, A. Miccheli, F. Zambelli, G. Pavesi, M.E. Bianchi., G. Camilloni
Epigenetic signatures of stress adaptation and flowering regulation in response to extended drought and recovery in Zea mays
2020 C. Forestan, S. Farinati, F. Zambelli, G. Pavesi, V. Rossi, S. Varotto
Targeting the scaffolding role of LSD1 (KDM1A) poises acute myeloid leukemia cells for retinoic acid-induced differentiation
2020 R. Ravasio, E. Ceccacci, L. Nicosia, A. Hosseini, P.L. Rossi, I. Barozzi, L. Fornasari, R.D. Zuffo, S. Valente, R. Fioravanti, C. Mercurio, M. Varasi, A. Mattevi, A. Mai, G. Pavesi, T. Bonaldi, S. Minucci
Next generation sequencing of SARS-CoV-2 genomes : challenges, applications and opportunities
2020 M. Chiara, A.M. D'Erchia, C. Gissi, C. Manzari, A. Parisi, N. Resta, F. Zambelli, E. Picardi, G. Pavesi, D.S. Horner, G. Pesole
On the NF-Y regulome as in ENCODE (2019)
2020 M. Ronzio, A. Bernardini, G. Pavesi, R. Mantovani, D. Dolfini
Integrating Peak Colocalization and Motif Enrichment Analysis for the Discovery of Genome-Wide Regulatory Modules and Transcription Factor Recruitment Rules
2020 M. Ronzio, F. Zambelli, D. Dolfini, R. Mantovani, G. Pavesi
hmSEEKER : identification of hmSILAC Doublets in MaxQuant Output Data
2019 E. Massignani, A. Cuomo, D. Musiani, S. Jammula, G. Pavesi, T. Bonaldi
Mapping the Global Chromatin Connectivity Network for Sox2 Function in Neural Stem Cell Maintenance
2019 J.A. Bertolini, R. Favaro, Y. Zhu, M. Pagin, C.Y. Ngan, C.H. Wong, H. Tjong, M.W. Vermunt, B. Martynoga, C. Barone, J. Mariani, M.J. Cardozo, N. Tabanera, F. Zambelli, S. Mercurio, S. Ottolenghi, P. Robson, M.P. Creyghton, P. Bovolenta, G. Pavesi, F. Guillemot, S.K. Nicolis, C. Wei