ZAMBELLI, FEDERICO
ZAMBELLI, FEDERICO
Dipartimento di Bioscienze
A Faster Algorithm for Motif Finding in Sequences from ChIP-Seq Data
2012-01-01 F. Zambelli, G. Pavesi
A web-based service for ChIP-Seq data analysis
2010-04-15 P. D'Onorio De Meo, M. D'Antonio, T. Castrignanò, F. Zambelli, G. Pavesi, G. Pesole
An acetylation-mono-ubiquitination switch on lysine 120 of H2B
2011-01-01 R. Gatta, D. Dolfini, F. Zambelli, C. Imbriano, G. Pavesi, R. Mantovani
Algorithmic Issues in the Analysis of Chip-Seq Data
2010-01-01 F. Zambelli, G. Pavesi
Ascan: a novel method for the study of allele specific expression in single individuals
2021-01-01 F. Zambelli, M. Chiara, E. Ferrandi, P. Mandreoli, M. Antonio Tangaro, G. Pavesi, G. Pesole
ASPicDB : a database of annotated transcript and protein variants generated by alternative splicing
2011-01-01 P.L. Martelli, M. D’Antonio, P. Bonizzoni, T. Castrignanò, A.M. D’Erchia, P. D’Onorio De Meo, P. Fariselli, M. Finelli, F. Licciulli, M. Mangiulli, F. Mignone, G. Pavesi, E. Picardi, R. Rizzi, I. Rossi, A. Valletti, A. Zauli, F. Zambelli, R. Casadio, G. Pesole
Assessment of orthologous splicing isoforms in human and mouse orthologous genes
2010-01-01 F. Zambelli, G. Pavesi, C. Gissi, D.S. Horner, G. Pesole
The bio.tools registry of software tools and data resources for the life sciences
2019-08-12 J. Ison, H. Ienasescu, P. Chmura, E. Rydza, H. Ménager, M. Kalaš, V. Schwämmle, B. Grüning, N. Beard, R. Lopez, S. Duvaud, H. Stockinger, B. Persson, R.S. Vařeková, T. Raček, J. Vondrášek, H. Peterson, A. Salumets, I. Jonassen, R. Hooft, T. Nyrönen, A. Valencia, S. Capella, J. Gelpí, F. Zambelli, B. Savakis, B. Leskošek, K. Rapacki, C. Blanchet, R. Jimenez, A. Oliveira, G. Vriend, O. Collin, J. van Helden, P. Løngreen, S. Brunak
Bioinformatic approaches to the identification of regulatory elements in genomic sequences
2009-12-18 F. Zambelli
Computational Tools for the Discovery of Regulatory Elements in Nucleotide Sequences from Co-Regulated or Homologous Genes
2006-01-01 G. Pavesi, F. Zambelli, G. Mauri, G. Pesole
CorGAT : a tool for the functional annotation of SARS-CoV-2 genomes
2020-12-21 M. Chiara, F. Zambelli, M.A. Tangaro, P. Mandreoli, D.S. Horner, G. Pesole
CoVaCS : a consensus variant calling system
2018-02-05 M. Chiara, S. Gioiosa, G. Chillemi, M. D'Antonio, T. Flati, E. Picardi, F. Zambelli, D.S. Horner, G. Pesole, T. Castrignanò
Critical assessment of bioinformatics methods for the characterization of pathological repeat expansions with single-molecule sequencing data
2019-12-03 M. Chiara, F. Zambelli, E. Picardi, D.S. Horner, G. Pesole
Cscan : finding common regulators of a set of genes by using a collection of genome-wide ChIP-seq datasets
2012-01-01 F. Zambelli, G.M. Prazzoli, G. Pesole, G. Pavesi
CSCAN: FINDING COMMON REGULATORS IN A SET OF GENES USING GENOME-WIDE CHIP-SEQ DATA
2011-10-01 F. Zambelli, G. Pavesi
DOME: recommendations for supervised machine learning validation in biology
2021-01-01 I. Walsh, D. Fishman, D. Garcia-Gasulla, T. Titma, G. Pollastri, E. Capriotti, R. Casadio, S. Capella-Gutierrez, D. Cirillo, A. Del Conte, A.C. Dimopoulos, V.D. Del Angel, J. Dopazo, P. Fariselli, J.M. Fernandez, F. Huber, A. Kreshuk, T. Lenaerts, P.L. Martelli, A. Navarro, P.O. Broin, J. Pinero, D. Piovesan, M. Reczko, F. Ronzano, V. Satagopam, C. Savojardo, V. Spiwok, M.A. Tangaro, G. Tartari, D. Salgado, A. Valencia, F. Zambelli, J. Harrow, F.E. Psomopoulos, S.C.E. Tosatto
ELIXIR-IT HPC@CINECA : high performance computing resources for the bioinformatics community
2020-08-25 T. Castrignanò, S. Gioiosa, T. Flati, M. Cestari, E. Picardi, M. Chiara, M. Fratelli, S. Amente, M. Cirilli, M.A. Tangaro, G. Chillemi, G. Pesole, F. Zambelli
ELIXIR-ITA: a growing support to national and international research in life sciences
2016-06-15 A. Via, F. Zambelli, D. Carnevali, T. Castrignanò, A. Cattani, G. Cuccuru, G. Della Vedova, G. Donvito, A. Facchiano, F. Marco, F. Galeazzi, L. Licata, A. Marabotti, L. Milanesi, E. Picardi, G. Profiti, S. Tomassini, S. Tosatto, G. Pesole
ELIXIR‐IT: a growing support to national and international research in life sciences
2016-03-07 A. Via, D. Carnevali, T. Castrignanò, A. Cestaro, G. Cuccuru, G. della Vedova, G. Donvito, . Facchiano, M. Fondi, F. Galeazzi, L. Licata, A. Marabotti, L. Milanesi, E. Picardi, G. Profiti, S. Tomassini, S. Tosatto, F. Zambelli, G. Pesole
Epigenetic signatures of stress adaptation and flowering regulation in response to extended drought and recovery in Zea mays
2020-01-01 C. Forestan, S. Farinati, F. Zambelli, G. Pavesi, V. Rossi, S. Varotto