CAPELLI, RICCARDO
CAPELLI, RICCARDO
Dipartimento di Bioscienze
Constant-pH simulation of the human β2 adrenergic receptor inactivation
2025 F. Ballabio, R. Capelli
PLUMED Tutorials: A collaborative, community-driven learning ecosystem
2025 G.A. Tribello, M. Bonomi, G. Bussi, C. Camilloni, B.I. Armstrong, A. Arsiccio, S. Aureli, F. Ballabio, M. Bernetti, L. Bonati, S.G.H. Brookes, Z.F. Brotzakis, R. Capelli, M. Ceriotti, K. Chan, P. Cossio, S. Dasetty, D. Donadio, B. Ensing, A.L. Ferguson, G. Fraux, J.D. Gale, F.L. Gervasio, T. Giorgino, N.S.M. Herringer, G.M. Hocky, S.E. Hoff, M. Invernizzi, O. Languin-Cattoën, V. Leone, V. Limongelli, O. Lopez-Acevedo, F. Marinelli, P. Febrer Martinez, M. Masetti, S. Mehdi, A. Michaelides, M.H. Murtada, M. Parrinello, P.M. Piaggi, A. Pietropaolo, F. Pietrucci, S. Pipolo, C. Pritchard, P. Raiteri, S. Raniolo, D. Rapetti, V. Rizzi, J. Rydzewski, M. Salvalaglio, C. Schran, A. Seal, A. Shayesteh Zadeh, T.F.D. Silva, V. Spiwok, G. Stirnemann, D. Sucerquia, P. Tiwary, O. Valsson, M. Vendruscolo, G.A. Voth, A.D. White, J. Wu
Unveiling an unexpected redox regulation of the folding, function and inhibition in the phosphotyrosine binding domain of FRS2
2025 V. Pennacchietti, L. Pagano, M. Di Felice, J. Toso, M. Bufano, A. Coluccia, R. Silvestri, R. Capelli, C. Camilloni, F. Malagrinò, A. Toto, S. Gianni
Mechanistic understanding of UvrA damage detection and lesion hand-off to UvrB in Nucleotide Excision Repair
2025 M. Genta, G. Ferrara, R. Capelli, D. Rondelli, S. Sertic, M. Bolognesi, M. Rizzi, F. Rossi, D. Jeruzalmi, A. Chaves-Sanjuan, R. Miggiano
Kinetic rate calculation via non-equilibrium dynamics
2025 B. Stegani, R. Capelli
Affibodies as valuable tool to prevent β2m aggregation under lysosomal-like conditions
2025 C. Visentin, G. Rizzi, Y. Wen, M. Hotot, D. Roy, T. Gräslund, R. Capelli, S. Ricagno
A Mg‐Chelatase Subunit I Missense Mutant in Barley Exhibits a Cold‐Sensitive Phenotype Under Field Conditions
2025 A. Persello, V. Torricella, F. Ballabio, C. Bertaso, L. Rotasperti, N. Jeran, S. Masiero, N.G. Capra, R. Capelli, C. Camilloni, L. Rossini, D.S. Horner, F. Camerlengo, G. Sangiorgi, A. Krieger‐liszkay, S. Petrac, L. Tadini, B. Grimm, P. Pesaresi
Estimation of Ligand Binding Free Energy Using Multi-eGO
2025 B. Stegani, E. Scalone, F. Bacic Toplek, T. Löhr, S. Gianni, M. Vendruscolo, R. Capelli, C. Camilloni
The standard coil or globule phases cannot describe the denatured state of structured proteins and intrinsically disordered proteins
2025 F. Righini, G. Potel, R. Capelli, G. Tiana
Circular oligomeric particles formed by Ros/MucR family members mediate DNA organization in α-proteobacteria
2024 A. Chaves-Sanjuan, G. D’Abrosca, V. Russo, B. Van Erp, A. Del Cont Bernard, R. Capelli, L. Pirone, M. Slapakova, D. Sgambati, R. Fattorusso, C. Isernia, L. Russo, I.S. Barton, R. Martin Roop, E.M. Pedone, M. Bolognesi, R.T. Dame, P.V. Pedone, M. Nardini, G. Malgieri, I. Baglivo
Proton Affinity and Conformational Integrity of a 24-Atom Triazine Macrocycle across Physiologically Relevant pH
2024 A.J. Menke, Z.P. Jacobus, L.E. Claton, O. Annunziata, R. Capelli, G.M. Pavan, E.E. Simanek
Multi-eGO: Model Improvements toward the Study of Complex Self-Assembly Processes
2024 F. Bacic Toplek, E. Scalone, B. Stegani, C. Paissoni, R. Capelli, C. Camilloni
A PDZ tandem repeat folds and unfolds via different pathways
2024 V. Pennacchietti, S. Di Matteo, L. Pagano, F.B. Toplek, B. Stegani, A. Toto, J. Toso, E. Puglisi, R. Capelli, M. Di Felice, F. Malagrinò, C. Camilloni, S. Gianni
Calcium-Driven In Silico Inactivation of a Human Olfactory Receptor
2024 L. Pirona, F. Ballabio, M. Alfonso-Prieto, R. Capelli
Lessons Learned from Multiobjective Automatic Optimizations of Classical Three-Site Rigid Water Models Using Microscopic and Macroscopic Target Experimental Observables
2023 M. Perrone, R. Capelli, C. Empereur-mot, A. Hassanali, G.M. Pavan
Computational Epitope Prediction and Design for Antibody Development and Detection
2023 R. Capelli, S.A. Serapian, G. Colombo
Predictions of the Poses and Affinity of a Ligand over the Entire Surface of a NEET Protein: The Case of Human MitoNEET
2023 K. Zuo, R. Capelli, G. Rossetti, R. Nechushtai, P. Carloni
Automatic Optimization of Lipid Models in the Martini Force Field Using SwarmCG
2023 C. Empereur-mot, K.B. Pedersen, R. Capelli, M. Crippa, C. Caruso, M. Perrone, P.C.T. Souza, S.J. Marrink, G.M. Pavan
Atomistic Insights into Hydrogen-Bonded Supramolecular Capsule Self-Assembly Dynamics
2023 R. Capelli, G. Piccini
Accurate and Efficient SAXS/SANS Implementation Including Solvation Layer Effects Suitable for Molecular Simulations
2023 F. Ballabio, C. Paissoni, M. Bollati, M. de Rosa, R. Capelli, C. Camilloni