CAPELLI, RICCARDO
CAPELLI, RICCARDO
Dipartimento di Bioscienze
Electric Field-Induced Destabilization and Surface Modulation of Aβ42 Fibrils in Molecular Simulations: Theoretical Implications for DC Stimulation in Alzheimer’s Disease
2026 F. Bacic Toplek, N.V. Maiorana, M. Guidetti, S. Marceglia, R. Capelli, A. Priori, C. Camilloni
Implementation and Validation of Titratable Cysteine in GROMACS-Based Constant-pH Molecular Dynamics
2026 R. Capelli
VPS13 has an important role in female germline development in Arabidopsis
2026 R. Petrella, C. Banfi, V. Balanzà, A. Cavalleri, F. Radi, L. Cornaro, R. Capelli, C. Camilloni, M. Chiara, P.J. Van Dijk, D. Rigola, R. Op Den Camp, M. Cucinotta, L. Colombo
PLUMED Tutorials: A collaborative, community-driven learning ecosystem
2025 G.A. Tribello, M. Bonomi, G. Bussi, C. Camilloni, B.I. Armstrong, A. Arsiccio, S. Aureli, F. Ballabio, M. Bernetti, L. Bonati, S.G.H. Brookes, Z.F. Brotzakis, R. Capelli, M. Ceriotti, K. Chan, P. Cossio, S. Dasetty, D. Donadio, B. Ensing, A.L. Ferguson, G. Fraux, J.D. Gale, F.L. Gervasio, T. Giorgino, N.S.M. Herringer, G.M. Hocky, S.E. Hoff, M. Invernizzi, O. Languin-Cattoën, V. Leone, V. Limongelli, O. Lopez-Acevedo, F. Marinelli, P. Febrer Martinez, M. Masetti, S. Mehdi, A. Michaelides, M.H. Murtada, M. Parrinello, P.M. Piaggi, A. Pietropaolo, F. Pietrucci, S. Pipolo, C. Pritchard, P. Raiteri, S. Raniolo, D. Rapetti, V. Rizzi, J. Rydzewski, M. Salvalaglio, C. Schran, A. Seal, A. Shayesteh Zadeh, T.F.D. Silva, V. Spiwok, G. Stirnemann, D. Sucerquia, P. Tiwary, O. Valsson, M. Vendruscolo, G.A. Voth, A.D. White, J. Wu
Kinetic rate calculation via non-equilibrium dynamics
2025 B. Stegani, R. Capelli
Estimation of Ligand Binding Free Energy Using Multi-eGO
2025 B. Stegani, E. Scalone, F. Bacic Toplek, T. Löhr, S. Gianni, M. Vendruscolo, R. Capelli, C. Camilloni
A Mg‐Chelatase Subunit I Missense Mutant in Barley Exhibits a Cold‐Sensitive Phenotype Under Field Conditions
2025 A. Persello, V. Torricella, F. Ballabio, C. Bertaso, L. Rotasperti, N. Jeran, S. Masiero, N.G. Capra, R. Capelli, C. Camilloni, L. Rossini, D.S. Horner, F. Camerlengo, G. Sangiorgi, A. Krieger‐liszkay, S. Petrac, L. Tadini, B. Grimm, P. Pesaresi
The standard coil or globule phases cannot describe the denatured state of structured proteins and intrinsically disordered proteins
2025 F. Righini, G. Potel, R. Capelli, G. Tiana
Unveiling an unexpected redox regulation of the folding, function and inhibition in the phosphotyrosine binding domain of FRS2
2025 V. Pennacchietti, L. Pagano, M. Di Felice, J. Toso, M. Bufano, A. Coluccia, R. Silvestri, R. Capelli, C. Camilloni, F. Malagrinò, A. Toto, S. Gianni
Affibodies as valuable tool to prevent β2m aggregation under lysosomal-like conditions
2025 C. Visentin, G. Rizzi, Y. Wen, M. Hotot, D. Roy, T. Gräslund, R. Capelli, S. Ricagno
Multi-ego: A Structure-based Framework for Molecular Simulations
2025 R. Capelli, B. Stegani, F. Bacic Toplek, E. Scalone, C. Camilloni
Mechanistic understanding of UvrA damage detection and lesion hand-off to UvrB in Nucleotide Excision Repair
2025 M. Genta, G. Ferrara, R. Capelli, D. Rondelli, S. Sertic, M. Bolognesi, M. Rizzi, F. Rossi, D. Jeruzalmi, A. Chaves-Sanjuan, R. Miggiano
Constant-pH simulation of the human β2 adrenergic receptor inactivation
2025 F. Ballabio, R. Capelli
Proton Affinity and Conformational Integrity of a 24-Atom Triazine Macrocycle across Physiologically Relevant pH
2024 A.J. Menke, Z.P. Jacobus, L.E. Claton, O. Annunziata, R. Capelli, G.M. Pavan, E.E. Simanek
Multi-eGO: Model Improvements toward the Study of Complex Self-Assembly Processes
2024 F. Bacic Toplek, E. Scalone, B. Stegani, C. Paissoni, R. Capelli, C. Camilloni
Calcium-Driven In Silico Inactivation of a Human Olfactory Receptor
2024 L. Pirona, F. Ballabio, M. Alfonso-Prieto, R. Capelli
Circular oligomeric particles formed by Ros/MucR family members mediate DNA organization in α-proteobacteria
2024 A. Chaves-Sanjuan, G. D’Abrosca, V. Russo, B. Van Erp, A. Del Cont Bernard, R. Capelli, L. Pirone, M. Slapakova, D. Sgambati, R. Fattorusso, C. Isernia, L. Russo, I.S. Barton, R. Martin Roop, E.M. Pedone, M. Bolognesi, R.T. Dame, P.V. Pedone, M. Nardini, G. Malgieri, I. Baglivo
A PDZ tandem repeat folds and unfolds via different pathways
2024 V. Pennacchietti, S. Di Matteo, L. Pagano, F. Bacic Toplek, B. Stegani, A. Toto, J. Toso, E. Puglisi, R. Capelli, M. Di Felice, F. Malagrinò, C. Camilloni, S. Gianni
Self-assembly of cyclic peptide monolayers by hydrophobic supramolecular hinges
2023 I. Insua, A. Cardellini, S. Díaz, J. Bergueiro, R. Capelli, G.M. Pavan, J. Montenegro
Predictions of the Poses and Affinity of a Ligand over the Entire Surface of a NEET Protein: The Case of Human MitoNEET
2023 K. Zuo, R. Capelli, G. Rossetti, R. Nechushtai, P. Carloni