SOTO GOMEZ, MAURICIO ABEL
SOTO GOMEZ, MAURICIO ABEL
Dipartimento di Informatica Giovanni Degli Antoni
Intrinsic-dimension analysis for guiding dimensionality reduction and data fusion in multi-omics data processing
2025 J. Gliozzo, M. Soto-Gomez, V. Guarino, A. Bonometti, A. Cabri, E. Cavalleri, J. Reese, P.N. Robinson, M. Mesiti, G. Valentini, E. Casiraghi
Plastic: An Easy to Use and Modular Tool for Benchmarking Tumor Phylogeny Reconstruction Pipelines
2025 A. Juyal, Z. Tayebi, A. Zelikovsky, M. Soto-Gomez, S. Ciccolella, G.D. Vedova, M. Patterson
SPIREX: Improving LLM-based relation extraction from RNA-focused scientific literature using graph machine learning
2024 E. Cavalleri, M. Soto Gomez, A. Pashaeibarough, D. Malchiodi, J.H. Caufield, J.T. Reese, C. Mungall, P.N. Robinson, E. Casiraghi, G. Valentini, M. Mesiti
An ontology-based knowledge graph for representing interactions involving RNA molecules
2024 E. Cavalleri, A. Cabri, M. Soto-Gomez, S. Bonfitto, P. Perlasca, J. Gliozzo, T.J. Callahan, J. Reese, P.N. Robinson, E. Casiraghi, G. Valentini, M. Mesiti
Shaping the causes of product returns: topic modeling on online customer reviews
2024 A. Mor, C. Orsenigo, M. Soto Gomez, C. Vercellis
The promises of large language models for protein design and modeling
2023 G. Valentini, D. Malchiodi, J. Gliozzo, M. Mesiti, M. Soto Gomez, A. Cabri, J. Reese, E. Casiraghi, P.N. Robinson
Towards the Construction of an RNA-based Knowledge Graph
2023 E. Cavalleri, S. Bonfitto, A. Cabri, J. Gliozzo, P. Perlasca, M. Soto-Gomez, G. Trucco, E. Casiraghi, G. Valentini, M. Mesiti
RNA-KG: An ontology-based knowledge graph for representing interactions involving RNA molecules
2023 E. Cavalleri, A. Cabri, M. Soto-Gomez, S. Bonfitto, P. Perlasca, J. Gliozzo, T.J. Callahan, J. Reese, P. N Robinson, E. Casiraghi, G. Valentini, M. Mesiti
Three Metaheuristic Approaches for Tumor Phylogeny Inference: An Experimental Comparison
2023 S. Ciccolella, G. Della Vedova, V. Filipović, M. Soto Gomez
A Meta-Graph for the Construction of an RNA-Centered Knowledge Graph
2023 E. Cavalleri, S. Bonfitto, A. Cabri, J. Gliozzo, P. Perlasca, M. Soto-Gomez, G. Trucco, E. Casiraghi, G. Valentini, M. Mesiti
Multimodal sentiment and emotion recognition in hyperbolic space
2021 K. Arano, C. Orsenigo, M. Soto Gomez, C. Vercellis
Inferring cancer progression from Single-Cell Sequencing while allowing mutation losses
2021 S. Ciccolella, C. Ricketts, M. Soto Gomez, M. Patterson, D. Silverbush, P. Bonizzoni, I. Hajirasouliha, G. Della Vedova
gpps: an ILP-based approach for inferring cancer progression with mutation losses from single cell data
2020 S. Ciccolella, M. Soto Gomez, M.D. Patterson, G. Della Vedova, I. Hajirasouliha, P. Bonizzoni
Modelling and linking company data in the EubusinessGraph platform
2019 A. Maurino, S. Mauricio, A. Rula, B. Elvesaeter, B.M. Von Zernichow, D. Roman
Does relaxing the infinite sites assumption give better tumor phylogenies? An ILP-based comparative approach
2019 P. Bonizzoni, S. Ciccolella, G.D. Vedova, M. Soto
Mapping Lexical Knowledge to Distributed Models for Ontology Concept Invention
2019 M. Vimercati, F. Bianchi, M. Soto Gomez, M. Palmonari
Type vector representations from text: An empirical analysis
2018 F. Bianchi, M. Soto Gomez, M. Palmonari, V. Cutrona
On distance-preserving elimination orderings in graphs: Complexity and algorithms
2018 D. Coudert, G. Ducoffe, N. Nisse, M. Soto Gomez
Beyond Perfect phylogeny: Multisample Phylogeny reconstruction via ILP
2017 P. Bonizzoni, G.D. Vedova, S. Ciccolella, M. Soto Gomez
Character-based phylogeny construction and its application to tumor evolution
2017 G.D. Vedova, M. Patterson, R. Rizzi, M. Soto Gomez