This tutorial covers the emerging field of coarse-grained cellular growth modeling, and aims to bridge the gap between theoretical foundations and practical application. By adopting an original “cookbook” approach, it is designed to offer a hands-on guide for constructing and analyzing different key aspects of cellular growth, focusing on available results for bacteria and beyond. The tutorial is structured as a series of step-by-step “recipes,” and covers essential concepts, recent literature, and key challenges. It aims to empower a broad audience, from students to seasoned researchers, to replicate, extend, and innovate in this scientific area. Specifically, each section provides detailed, bare-bones models to start working in each area, from basic steady-state growth to variable environments and focusing on different key layers relevant to biosynthesis, transcription, translation, nutrient sensing, and protein degradation, links between cell cycle and growth, ending with ecological insights.
Hands-On Growth Laws Theory Cookbook / R. Droghetti, M. Corigliano, L. Calabrese, P. Fuchs, A. Vaidyanathan, J. Keisers, G. Micali, M. Cosentino Lagomarsino, L. Ciandrini. - In: PRX LIFE. - ISSN 2835-8279. - 4:1(2026 May), pp. 012001.1-012001.53. [10.1103/x33x-srz4]
Hands-On Growth Laws Theory Cookbook
R. DroghettiPrimo
;M. CoriglianoSecondo
;P. Fuchs;M. Cosentino Lagomarsino
Co-ultimo
;
2026
Abstract
This tutorial covers the emerging field of coarse-grained cellular growth modeling, and aims to bridge the gap between theoretical foundations and practical application. By adopting an original “cookbook” approach, it is designed to offer a hands-on guide for constructing and analyzing different key aspects of cellular growth, focusing on available results for bacteria and beyond. The tutorial is structured as a series of step-by-step “recipes,” and covers essential concepts, recent literature, and key challenges. It aims to empower a broad audience, from students to seasoned researchers, to replicate, extend, and innovate in this scientific area. Specifically, each section provides detailed, bare-bones models to start working in each area, from basic steady-state growth to variable environments and focusing on different key layers relevant to biosynthesis, transcription, translation, nutrient sensing, and protein degradation, links between cell cycle and growth, ending with ecological insights.| File | Dimensione | Formato | |
|---|---|---|---|
|
x33x-srz4.pdf
accesso aperto
Tipologia:
Publisher's version/PDF
Licenza:
Creative commons
Dimensione
4.17 MB
Formato
Adobe PDF
|
4.17 MB | Adobe PDF | Visualizza/Apri |
Pubblicazioni consigliate
I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.




