BESOZZI, DANIELA
BESOZZI, DANIELA
Dipartimento di Informatica Giovanni Degli Antoni
Modeling cell proliferation in human acute myeloid leukemia xenografts
2019 M.S. Nobile, T. Vlachou, S. Spolaor, D. Bossi, P. Cazzaniga, L. Lanfrancone, G. Mauri, P.G. Pelicci, D. Besozzi
Simulation and analysis of the blood coagulation cascade accelerated on GPU
2014 M. Bellini, D. Besozzi, P. Cazzaniga, G. Mauri, M.S. Nobile
CuTauLeaping : a GPU-powered tau-leaping stochastic simulator for massive parallel analyses of biological systems
2014 M.S. Nobile, P. Cazzaniga, D. Besozzi, D. Pescini, G. Mauri
Molecular diffusion and compartmentalization in signal transduction pathways : an application of membrane systems to the study of bacterial chemotaxis
2014 P. Cazzaniga, D. Besozzi, D. Pescini, G. Mauri
Massive exploration of perturbed conditions of the blood coagulation cascade through GPU parallelization
2014 P. Cazzaniga, M.S. Nobile, D. Besozzi, M. Bellini, G. Mauri
Computational strategies for a system-level understanding of metabolism
2014 P. Cazzaniga, C. Damiani, D. Besozzi, R. Colombo, M.S. Nobile, D. Gaglio, D. Pescini, S. Molinari, G. Mauri, L. Alberghina, M. Vanoni
GPU-accelerated simulations of mass-action kinetics models with cupSODA
2014 M.S. Nobile, P. Cazzaniga, D. Besozzi, G. Mauri
The foundation of Evolutionary Petri Nets
2013 M.S. Nobile, D. Besozzi, P. Cazzaniga, G. Mauri
In vivo and in silico analysis of PCNA ubiquitylation in the activation of the Post Replication Repair pathway in S. cerevisiae
2013 F. Amara, R. Colombo, P. Cazzaniga, D. Pescini, A. Csikász Nagy, M. Muzi Falconi, D. Besozzi, P. Plevani
Computational methods in systems biology: case studies and biological insights
2013 D. Besozzi
Reverse engineering of kinetic reaction networks by means of Cartesian Genetic Programming and Particle Swarm Optimization
2013 M.S. Nobile, D. Besozzi, P. Cazzaniga, D. Pescini, G. Mauri
cupSODA: a CUDA-powered simulator of mass-action kinetics
2013 M.S. Nobile, D. Besozzi, P. Cazzaniga, G. Mauri, D. Pescini
GPU-powered simulation methodologies for biological systems
2013 D. Besozzi, G. Caravagna, P. Cazzaniga, M.S. Nobile, D. Pescini, A. Re
An excursion in reaction systems : from computer science to biology
2012 L. Corolli, F. Marini, C. Maj, D. Besozzi, G. Mauri
Estimating reaction constants in stochastic biological systems with a multi-swarm PSO running on GPUs
2012 M.S. Nobile, D. Besozzi, P. Cazzaniga, G. Mauri, D. Pescini
A GPU-based multi-swarm PSO method for parameter estimation in stochastic biological systems exploiting discrete-time target series
2012 M.S. Nobile, D. Besozzi, P. Cazzaniga, G. Mauri, D. Pescini
Simulation of the Ras/cAMP/PKA pathway in budding yeast highlights the establishment of stable oscillatory states
2012 D. Pescini, P. Cazzaniga, D. Besozzi, G. Mauri, L. Amigoni, S. Colombo, E. Martegani
The role of feedback control mechanisms on the establishment of oscillatory regimes in the Ras/cAMP/PKA pathway in S. cerevisiae
2012 D. Besozzi, P. Cazzaniga, D. Pescini, G. Mauri, S. Colombo, E. Martegani
Modeling diffusion in a signal transduction pathway: the use of virtual volumes in P systems
2011 D. Besozzi, P. Cazzaniga, S. Cocolo, G. Mauri, D. Pescini
The role of Ras modulators and feedback control mechanisms on the establishment of oscillations in the Ras/cAMP/PKA pathway in S. cerevisiae
2011 P. Cazzaniga, D. Besozzi, D. Pescini, G. Mauri, S. Colombo, E. Martegani