The sodium-potassium pump is a fundamental transmembrane protein present in all animal cells. The functioning of the pump is described and analyzed in the formal framework of P systems, considered here as tools for modelling a bio-cellular process. New features such as variable membrane labelling, activation conditions for rules, membrane bilayer and specific communication rules are defined, to the aim of providing a more appropriate description of the pump. A Sevilla carpet of the sodium-potassium pump is given, as a starting point to identify the pumps as the processors able to execute the rules of a high-level P system in a maximal parallel and nondeterministic manner, activated and controlled by steady-state concentrations. Some related topics for further research are proposed.
A P system description of the sodium-potassium pump / D. Besozzi, G. Ciobanu - In: Membrane Computing: 5th InternationalWorkshop, WMC 2004 : Milan, Italy, June 14-16, 2004 : Revised Selected and Invited Papers / Carlos Martin-Vide [et al.]. - Berlin : Springer-Verlag, 2005. - ISBN 354020895X. - pp. 210-223 (( Intervento presentato al 5. convegno International Workshop on Membrane Computing, tenutosi a Milano, Italy nel 2004.
A P system description of the sodium-potassium pump
D. BesozziPrimo
;
2005
Abstract
The sodium-potassium pump is a fundamental transmembrane protein present in all animal cells. The functioning of the pump is described and analyzed in the formal framework of P systems, considered here as tools for modelling a bio-cellular process. New features such as variable membrane labelling, activation conditions for rules, membrane bilayer and specific communication rules are defined, to the aim of providing a more appropriate description of the pump. A Sevilla carpet of the sodium-potassium pump is given, as a starting point to identify the pumps as the processors able to execute the rules of a high-level P system in a maximal parallel and nondeterministic manner, activated and controlled by steady-state concentrations. Some related topics for further research are proposed.Pubblicazioni consigliate
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