Biopolymers are characterized by heterogeneous interactions, and usually perform their biological tasks forming contacts within domains of limited size. Combining polymer theory with a replica approach, we study the scaling properties of the probability of contact formation in random heteropolymers as a function of their linear distance. It is found that, close to or above the θ point, it is possible to define a contact probability which is typical (i.e., "self-averaging") for different realizations of the heterogeneous interactions, and which displays an exponential cutoff, dependent on temperature and on the interaction range. In many cases this cutoff is comparable with the typical sizes of domains in biopolymers. While it is well known that disorder causes interesting effects at low temperature, the behavior elucidated in the present study is an example of a nontrivial effect at high temperature.

Effect of disorder on the contact probability of elongated conformations of biopolymers / G. Tiana. - In: PHYSICAL REVIEW E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS. - ISSN 1539-3755. - 92:1(2015), pp. 010702.1-010702.4. [10.1103/PhysRevE.92.010702]

Effect of disorder on the contact probability of elongated conformations of biopolymers

G. Tiana
Primo
2015

Abstract

Biopolymers are characterized by heterogeneous interactions, and usually perform their biological tasks forming contacts within domains of limited size. Combining polymer theory with a replica approach, we study the scaling properties of the probability of contact formation in random heteropolymers as a function of their linear distance. It is found that, close to or above the θ point, it is possible to define a contact probability which is typical (i.e., "self-averaging") for different realizations of the heterogeneous interactions, and which displays an exponential cutoff, dependent on temperature and on the interaction range. In many cases this cutoff is comparable with the typical sizes of domains in biopolymers. While it is well known that disorder causes interesting effects at low temperature, the behavior elucidated in the present study is an example of a nontrivial effect at high temperature.
No
English
Settore FIS/03 - Fisica della Materia
Articolo
Esperti anonimi
Pubblicazione scientifica
2015
American Physical Society
92
1
010702
1
4
4
Pubblicato
Periodico con rilevanza internazionale
crossref
Aderisco
info:eu-repo/semantics/article
Effect of disorder on the contact probability of elongated conformations of biopolymers / G. Tiana. - In: PHYSICAL REVIEW E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS. - ISSN 1539-3755. - 92:1(2015), pp. 010702.1-010702.4. [10.1103/PhysRevE.92.010702]
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/2434/292155
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