Introduction Horizontal gene transfer (HGT) of antibiotic resistance genes (ARGs) is one of the primary routes of antimicrobial resistance (AMR) dissemination. In the One Health context, tracking the spread of mobile genetic elements (MGEs) carrying ARGs in agri-food ecosystems is pivotal in understanding AMR diffusion and estimating potential risks for human health. So far, little attention has been devoted to plant niches; hence, this study aimed to evaluate the conjugal transfer of ARGs to the bacterial community associated with the plant rhizosphere, a hotspot for microbial abundance and activity in the soil. We simulated a source of AMR determinants that could enter the food chain via plants through irrigation.Methods Among the bacterial strains isolated from treated wastewater, the strain Klebsiella variicola EEF15 was selected as an ARG donor because of the relevance of Enterobacteriaceae in the AMR context and the One Health framework. The strain ability to recolonize lettuce, chosen as a model for vegetables that were consumed raw, was assessed by a rifampicin resistant mutant. K. variicola EEF15 was genetically manipulated to track the conjugal transfer of the broad host range plasmid pKJK5 containing a fluorescent marker gene to the natural rhizosphere microbiome obtained from lettuce plants. Transconjugants were sorted by fluorescent protein expression and identified through 16S rRNA gene amplicon sequencing.Results and discussion K. variicola EEF15 was able to colonize the lettuce rhizosphere and inhabit its leaf endosphere 7 days past bacterial administration. Fluorescence stereomicroscopy revealed plasmid transfer at a frequency of 10-3; cell sorting allowed the selection of the transconjugants. The conjugation rates and the strain's ability to colonize the plant rhizosphere and leaf endosphere make strain EEF15::lacIq-pLpp-mCherry-gmR with pKJK5::Plac::gfp an interesting candidate to study ARG spread in the agri-food ecosystem. Future studies taking advantage of additional environmental donor strains could provide a comprehensive snapshot of AMR spread in the One Health context.

Conjugal plasmid transfer in the plant rhizosphere in the One Health context / F. Riva, A. Dechesne, E.M. Eckert, V. Riva, S. Borin, F. Mapelli, B.F. Smets, E. Crotti. - In: FRONTIERS IN MICROBIOLOGY. - ISSN 1664-302X. - 15:(2024 Aug 29), pp. 1457854.1-1457854.11. [10.3389/fmicb.2024.1457854]

Conjugal plasmid transfer in the plant rhizosphere in the One Health context

F. Riva
Primo
;
V. Riva;S. Borin;F. Mapelli;E. Crotti
Ultimo
2024

Abstract

Introduction Horizontal gene transfer (HGT) of antibiotic resistance genes (ARGs) is one of the primary routes of antimicrobial resistance (AMR) dissemination. In the One Health context, tracking the spread of mobile genetic elements (MGEs) carrying ARGs in agri-food ecosystems is pivotal in understanding AMR diffusion and estimating potential risks for human health. So far, little attention has been devoted to plant niches; hence, this study aimed to evaluate the conjugal transfer of ARGs to the bacterial community associated with the plant rhizosphere, a hotspot for microbial abundance and activity in the soil. We simulated a source of AMR determinants that could enter the food chain via plants through irrigation.Methods Among the bacterial strains isolated from treated wastewater, the strain Klebsiella variicola EEF15 was selected as an ARG donor because of the relevance of Enterobacteriaceae in the AMR context and the One Health framework. The strain ability to recolonize lettuce, chosen as a model for vegetables that were consumed raw, was assessed by a rifampicin resistant mutant. K. variicola EEF15 was genetically manipulated to track the conjugal transfer of the broad host range plasmid pKJK5 containing a fluorescent marker gene to the natural rhizosphere microbiome obtained from lettuce plants. Transconjugants were sorted by fluorescent protein expression and identified through 16S rRNA gene amplicon sequencing.Results and discussion K. variicola EEF15 was able to colonize the lettuce rhizosphere and inhabit its leaf endosphere 7 days past bacterial administration. Fluorescence stereomicroscopy revealed plasmid transfer at a frequency of 10-3; cell sorting allowed the selection of the transconjugants. The conjugation rates and the strain's ability to colonize the plant rhizosphere and leaf endosphere make strain EEF15::lacIq-pLpp-mCherry-gmR with pKJK5::Plac::gfp an interesting candidate to study ARG spread in the agri-food ecosystem. Future studies taking advantage of additional environmental donor strains could provide a comprehensive snapshot of AMR spread in the One Health context.
English
agri-food system; conjugation; endosphere; horizontal gene transfer; microbial community; ready-to-eat vegetables; rhizosphere
Settore AGRI-08/A - Microbiologia agraria, alimentare e ambientale
Articolo
Esperti anonimi
Pubblicazione scientifica
Goal 3: Good health and well-being
Goal 6: Clean water and sanitation
   Eco-evolutionary approach to identification and isolation of freshwater bacteria harbouring antibiotic resistance genes
   IdeARG
   MINISTERO DELL'ISTRUZIONE E DEL MERITO
   2020T8T5MM_002
29-ago-2024
Frontiers Media S.A.
15
1457854
1
11
11
Pubblicato
Periodico con rilevanza internazionale
crossref
Aderisco
info:eu-repo/semantics/article
Conjugal plasmid transfer in the plant rhizosphere in the One Health context / F. Riva, A. Dechesne, E.M. Eckert, V. Riva, S. Borin, F. Mapelli, B.F. Smets, E. Crotti. - In: FRONTIERS IN MICROBIOLOGY. - ISSN 1664-302X. - 15:(2024 Aug 29), pp. 1457854.1-1457854.11. [10.3389/fmicb.2024.1457854]
open
Prodotti della ricerca::01 - Articolo su periodico
8
262
Article (author)
Periodico con Impact Factor
F. Riva, A. Dechesne, E.M. Eckert, V. Riva, S. Borin, F. Mapelli, B.F. Smets, E. Crotti
File in questo prodotto:
File Dimensione Formato  
Riva et al 2024 Front Microbiol.pdf

accesso aperto

Tipologia: Publisher's version/PDF
Dimensione 765.97 kB
Formato Adobe PDF
765.97 kB Adobe PDF Visualizza/Apri
Pubblicazioni consigliate

I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.

Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/2434/1115158
Citazioni
  • ???jsp.display-item.citation.pmc??? 0
  • Scopus 0
  • ???jsp.display-item.citation.isi??? 0
  • OpenAlex ND
social impact