As no one symptom can predict disease severity or the need for dedicated medical support in coronavirus disease 2019 (COVID-19), we asked whether documenting symptom time series over the first few days informs outcome. Unsupervised time series clustering over symptom presentation was performed on data collected from a training dataset of completed cases enlisted early from the COVID Symptom Study Smartphone application, yielding six distinct symptom presentations. Clustering was validated on an independent replication dataset between 1 and 28 May 2020. Using the first 5 days of symptom logging, the ROC-AUC (receiver operating characteristic - area under the curve) of need for respiratory support was 78.8%, substantially outperforming personal characteristics alone (ROC-AUC 69.5%). Such an approach could be used to monitor at-risk patients and predict medical resource requirements days before they are required.
Symptom clusters in COVID-19: A potential clinical prediction tool from the COVID Symptom Study app / C. Sudre, K. Lee, M. Lochlainn, T. Varsavsky, B. Murray, M. Graham, C. Menni, M. Modat, R. Bowyer, L. Nguyen, D. Drew, A. Joshi, W. Ma, C. Guo, C. Lo, S. Ganesh, A. Buwe, J. Pujol, J. du Cadet, A. Visconti, M. Freidin, J. Moustafa, M. Falchi, R. Davies, M. Gomez, T. Fall, M. Cardoso, J. Wolf, P. Franks, A. Chan, T. Spector, C. Steves, S. Ourselin. - In: SCIENCE ADVANCES. - ISSN 2375-2548. - 7:12(2021), pp. eabd4177.1-eabd4177.7. [10.1126/sciadv.abd4177]
Symptom clusters in COVID-19: A potential clinical prediction tool from the COVID Symptom Study app
C. Menni;
2021
Abstract
As no one symptom can predict disease severity or the need for dedicated medical support in coronavirus disease 2019 (COVID-19), we asked whether documenting symptom time series over the first few days informs outcome. Unsupervised time series clustering over symptom presentation was performed on data collected from a training dataset of completed cases enlisted early from the COVID Symptom Study Smartphone application, yielding six distinct symptom presentations. Clustering was validated on an independent replication dataset between 1 and 28 May 2020. Using the first 5 days of symptom logging, the ROC-AUC (receiver operating characteristic - area under the curve) of need for respiratory support was 78.8%, substantially outperforming personal characteristics alone (ROC-AUC 69.5%). Such an approach could be used to monitor at-risk patients and predict medical resource requirements days before they are required.| File | Dimensione | Formato | |
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