In recent years, several genome-wide approaches based on RNA sequencing (RNA-seq) have been developed. These methods allow a comprehensive and dynamic view of the structure and function of the multi-layered RNA pathways and networks. Many of these approaches, including the promising one of single-cell transcriptome analysis, have been successfully applied to Pseudomonas aeruginosa. However, we are only at the beginning because only a few surrounding conditions have been considered. Here, we aim to illustrate the different types of approaches based on RNA-seq that will lead us in the future to a better understanding of the dynamics of RNA biology in P. aeruginosa.

Genome-Scale Analysis of the Structure and Function of RNA Pathways and Networks in Pseudomonas aeruginosa / S. Ferrara, G. Bertoni (METHODS IN MOLECULAR BIOLOGY). - In: Pseudomonas aeruginosa / [a cura di] G. Bertoni, S. Ferrara. - [s.l] : Springer Nature, 2024. - ISBN 978-1-0716-3472-1. - pp. 183-195 [10.1007/978-1-0716-3473-8_13]

Genome-Scale Analysis of the Structure and Function of RNA Pathways and Networks in Pseudomonas aeruginosa

G. Bertoni
Ultimo
2024

Abstract

In recent years, several genome-wide approaches based on RNA sequencing (RNA-seq) have been developed. These methods allow a comprehensive and dynamic view of the structure and function of the multi-layered RNA pathways and networks. Many of these approaches, including the promising one of single-cell transcriptome analysis, have been successfully applied to Pseudomonas aeruginosa. However, we are only at the beginning because only a few surrounding conditions have been considered. Here, we aim to illustrate the different types of approaches based on RNA-seq that will lead us in the future to a better understanding of the dynamics of RNA biology in P. aeruginosa.
Post-transcriptional control; Pseudomonas aeruginosa; RNA binding protein; RNA-RNA interaction; RNA-protein interaction; RNA-seq; Small RNAs; Transcriptional control
Settore BIO/19 - Microbiologia Generale
2024
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/2434/1010328
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