Two major problems related the unsupervised analysis of gene expression data are represented by the accuracy and reliability of the discovered clusters, and by the biological fact that classes of examples or classes of functionally related genes are sometimes not clearly defined. To face these items, we propose a fuzzy ensemble clustering approach to both improve the accuracy of clustering results and to take into account the inherent fuzziness of biological and bio-medical gene expression data. Preliminary results with DNA microarray data of lymphoma and adenocarcinoma patients show the effectiveness of the proposed approach.

Fuzzy ensemble clustering for DNA microarray data analysis / R. Avogadri, G. Valentini (LECTURE NOTES IN COMPUTER SCIENCE). - In: Applications of Fuzzy Sets Theory / [a cura di] F. Masulli, S. Mitra, G. Pasi. - Berlin : Springer, 2007 Aug 24. - ISBN 9783540733997. - pp. 537-543 (( Intervento presentato al 7th. convegno WILF International Workshop on Fuzzy Logic and Applications : July 7th - 10th tenutosi a Camogli, Italy nel 2007 [10.1007/978-3-540-73400-0_68].

Fuzzy ensemble clustering for DNA microarray data analysis

R. Avogadri
Primo
;
G. Valentini
Ultimo
2007

Abstract

Two major problems related the unsupervised analysis of gene expression data are represented by the accuracy and reliability of the discovered clusters, and by the biological fact that classes of examples or classes of functionally related genes are sometimes not clearly defined. To face these items, we propose a fuzzy ensemble clustering approach to both improve the accuracy of clustering results and to take into account the inherent fuzziness of biological and bio-medical gene expression data. Preliminary results with DNA microarray data of lymphoma and adenocarcinoma patients show the effectiveness of the proposed approach.
Settore INF/01 - Informatica
24-ago-2007
http://www.springerlink.com/content/026576510252t853/?p=e89fe52007ac4749a1ab2694e65ca3bb&pi=67
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/2434/44129
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