A key challenge in the analysis of cancer genomes is the identification of driver genes from the vast number of mutations present in a cohort of patients. DOTS-Finder is a new tool that allows the detection of driver genes through the sequential application of functional and frequentist approaches, and is specifically tailored to the analysis of few tumor samples. We have identified driver genes in the genomic data of 34 tumor types derived from existing exploratory projects such as The Cancer Genome Atlas and from studies investigating the usefulness of genomic information in the clinical settings. DOTS-Finder is available at https://cgsb.genomics.iit.it/wiki/projects/DOTS-Finder/.

DOTS-Finder : a comprehensive tool for assessing driver genes in cancer genomes / G.E.M. Melloni, A.G.E. Ogier, S. de Pretis, L. Mazzarella, M. Pelizzola, P.G. Pelicci, L. Riva. - In: GENOME MEDICINE. - ISSN 1756-994X. - 6(2014 Jun 10), pp. 44.1-44.13. [10.1186/gm563]

DOTS-Finder : a comprehensive tool for assessing driver genes in cancer genomes

G.E.M. Melloni
Primo
;
L. Mazzarella;P.G. Pelicci
Penultimo
;
2014

Abstract

A key challenge in the analysis of cancer genomes is the identification of driver genes from the vast number of mutations present in a cohort of patients. DOTS-Finder is a new tool that allows the detection of driver genes through the sequential application of functional and frequentist approaches, and is specifically tailored to the analysis of few tumor samples. We have identified driver genes in the genomic data of 34 tumor types derived from existing exploratory projects such as The Cancer Genome Atlas and from studies investigating the usefulness of genomic information in the clinical settings. DOTS-Finder is available at https://cgsb.genomics.iit.it/wiki/projects/DOTS-Finder/.
molecular biology; molecular medicine; genetics (clinical); genetics
Settore MED/04 - Patologia Generale
10-giu-2014
Article (author)
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/2434/268836
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