Starting from an acknowledgment of the plurality of epistemic motivations driving phenotype representations, our main contribution is a distinction between six categories of human agents as individuals and groups focused around particular epistemic interests. We analyse the corresponding impact of these groups and individuals on representation types, mapping and reasoning scenarios, using the example of breast cancer research. We in particular demonstrate a heterogeneity of representation types for breast cancer phenotypes and stress that the characterisation of a tumour phenotype often includes parameters that go beyond the representation of a corresponding empirically observed tumour, thus reflecting significant functional features of the phenotypes as well as epistemic interests that drive the modes of representation. Accordingly,the represented features of cancer phenotypes function as epistemic vehicles aiding various classifications, explanations, and predictions.

Beyond the tumor : breast cancer phenotypes. Towards a pluralistic integration of heterogeneous representations / A. Sojic, K. O. - In: Proceedings of the 3rd Workshop of GI Workgroup : Ontologies in Biomedicine and Life Sciences (OBML) / [a cura di] H. Herre, R. Hoehndorf, F. Loebe. - Leipzig : Universität Leipzig, 2011 Sep 25. - pp. 65-70 (( Intervento presentato al 3. convegno Workshop of the GI workgroup : Ontologies in biomedicine and life sciences (OBML) tenutosi a Berlin nel 2011.

Beyond the tumor : breast cancer phenotypes. Towards a pluralistic integration of heterogeneous representations

A. Sojic
Primo
;
2011

Abstract

Starting from an acknowledgment of the plurality of epistemic motivations driving phenotype representations, our main contribution is a distinction between six categories of human agents as individuals and groups focused around particular epistemic interests. We analyse the corresponding impact of these groups and individuals on representation types, mapping and reasoning scenarios, using the example of breast cancer research. We in particular demonstrate a heterogeneity of representation types for breast cancer phenotypes and stress that the characterisation of a tumour phenotype often includes parameters that go beyond the representation of a corresponding empirically observed tumour, thus reflecting significant functional features of the phenotypes as well as epistemic interests that drive the modes of representation. Accordingly,the represented features of cancer phenotypes function as epistemic vehicles aiding various classifications, explanations, and predictions.
epistemic interests ; knowledge integration ; breast cancer phenotypes ; biomedical ontology
Settore M-FIL/02 - Logica e Filosofia della Scienza
Settore MED/06 - Oncologia Medica
Settore BIO/11 - Biologia Molecolare
25-set-2011
http://www.onto-med.de/obml/ws2011/obml2011report.pdf
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/2434/214117
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